Index

A

Access (class in cardinal_pythonlib.rnc_db) ActivityCounter (class in cardinal_pythonlib.progress) add() (cardinal_pythonlib.interval.IntervalList method) add_blank_row() (in module cardinal_pythonlib.tools.estimate_mysql_memory_usage) add_column() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) add_index() (cardinal_pythonlib.sphinxtools.AutodocIndex method) (in module cardinal_pythonlib.sqlalchemy.schema) add_indexes() (cardinal_pythonlib.sphinxtools.AutodocIndex method) add_info_to_exception() (in module cardinal_pythonlib.exceptions) add_line_if_absent() (in module cardinal_pythonlib.file_io) add_master_user_mysql() (in module cardinal_pythonlib.rnc_db) add_never_cache_headers() (in module cardinal_pythonlib.wsgi.cache_mw) add_source_files() (cardinal_pythonlib.sphinxtools.AutodocIndex method) add_var_mb() (in module cardinal_pythonlib.tools.estimate_mysql_memory_usage) AddHeadersMiddleware (class in cardinal_pythonlib.wsgi.headers_mw) all_drugs_where() (in module cardinal_pythonlib.psychiatry.drugs) all_generics (cardinal_pythonlib.psychiatry.drugs.Drug attribute) all_subclasses() (in module cardinal_pythonlib.classes) any_contiguous() (cardinal_pythonlib.interval.IntervalList method) any_overlap() (cardinal_pythonlib.interval.IntervalList method) apply_handler_to_all_logs() (in module cardinal_pythonlib.logs) apply_handler_to_root_log() (in module cardinal_pythonlib.logs) are_debian_packages_installed() (in module cardinal_pythonlib.platformfunc) args_kwargs_to_initdict() (in module cardinal_pythonlib.json.serialize) arraysize (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType attribute) as_string() (cardinal_pythonlib.snomed.SnomedAttribute method) (cardinal_pythonlib.snomed.SnomedAttributeGroup method) (cardinal_pythonlib.snomed.SnomedAttributeSet method) (cardinal_pythonlib.snomed.SnomedBase method) (cardinal_pythonlib.snomed.SnomedConcept method) (cardinal_pythonlib.snomed.SnomedExpression method) (cardinal_pythonlib.snomed.SnomedFocusConcept method) (cardinal_pythonlib.snomed.SnomedRefinement method) (cardinal_pythonlib.snomed.SnomedValue method)

ask_user() (in module cardinal_pythonlib.ui_commandline) ask_user_password() (in module cardinal_pythonlib.ui_commandline) assert_version_eq() (in module cardinal_pythonlib.version) assert_version_ge() (in module cardinal_pythonlib.version) assert_version_gt() (in module cardinal_pythonlib.version) assert_version_le() (in module cardinal_pythonlib.version) assert_version_lt() (in module cardinal_pythonlib.version) assign_from_list() (in module cardinal_pythonlib.rnc_db) AsynchronousFileReader (class in cardinal_pythonlib.subproc) AthenaConceptRelationshipRow (class in cardinal_pythonlib.athena_ohdsi) AthenaConceptRow (class in cardinal_pythonlib.athena_ohdsi) AthenaRelationshipId (class in cardinal_pythonlib.athena_ohdsi) AthenaVocabularyId (class in cardinal_pythonlib.athena_ohdsi) atoi() (in module cardinal_pythonlib.sort) AttrDict (class in cardinal_pythonlib.enumlike) attrgetter_nonesort (class in cardinal_pythonlib.sort) auto_delete_files_on_instance_change() (in module cardinal_pythonlib.django.files) auto_delete_files_on_instance_delete() (in module cardinal_pythonlib.django.files) auto_repr() (in module cardinal_pythonlib.reprfunc) auto_str() (in module cardinal_pythonlib.reprfunc) AutodocIndex (class in cardinal_pythonlib.sphinxtools) AutodocMethod (class in cardinal_pythonlib.sphinxtools) AutoNumberEnum (class in cardinal_pythonlib.enumlike) AutoNumberObject (class in cardinal_pythonlib.enumlike) AutoStrEnum (class in cardinal_pythonlib.enumlike) AutoStrEnumMeta (class in cardinal_pythonlib.enumlike) AutoStringObject (class in cardinal_pythonlib.enumlike) availability_anything() (in module cardinal_pythonlib.extract_text) availability_doc() (in module cardinal_pythonlib.extract_text) availability_pdf() (in module cardinal_pythonlib.extract_text) availability_rtf() (in module cardinal_pythonlib.extract_text)

B

bandpass_filter() (in module cardinal_pythonlib.dsp) base64_64format_decode() (in module cardinal_pythonlib.convert) base64_64format_encode() (in module cardinal_pythonlib.convert) bayes_posterior() (in module cardinal_pythonlib.probability) bd0 (in module cardinal_pythonlib.rpm) beta_cdf_fast (in module cardinal_pythonlib.rpm) beta_pdf_fast (in module cardinal_pythonlib.rpm)

BetweenDict (class in cardinal_pythonlib.betweendict) blank_object() (in module cardinal_pythonlib.rnc_db) bold_if_not_blank() (in module cardinal_pythonlib.rnc_web) booklet_nup_pdf() (in module cardinal_pythonlib.tools.pdf_to_booklet) BraceMessage (class in cardinal_pythonlib.logs) BraceStyleAdapter (class in cardinal_pythonlib.logs) bytes2human() (in module cardinal_pythonlib.sizeformatter) bytes_to_long() (in module cardinal_pythonlib.hash)

C

calc_n_sheets() (in module cardinal_pythonlib.tools.pdf_to_booklet) calc_n_virtual_pages() (in module cardinal_pythonlib.tools.pdf_to_booklet) callproc() (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType method) cardinal_pythonlib.argparse_func (module) cardinal_pythonlib.athena_ohdsi (module) cardinal_pythonlib.betweendict (module) cardinal_pythonlib.buildfunc (module) cardinal_pythonlib.bulk_email.constants (module) cardinal_pythonlib.classes (module) cardinal_pythonlib.cmdline (module) cardinal_pythonlib.compression (module) cardinal_pythonlib.configfiles (module) cardinal_pythonlib.contexts (module) cardinal_pythonlib.convert (module) cardinal_pythonlib.datamapping (module) cardinal_pythonlib.datetimefunc (module) cardinal_pythonlib.dbfunc (module) cardinal_pythonlib.debugging (module) cardinal_pythonlib.dicts (module) cardinal_pythonlib.django.django_constants (module) cardinal_pythonlib.django.fields.helpers (module) cardinal_pythonlib.django.files (module) cardinal_pythonlib.docker (module) cardinal_pythonlib.dogpile_cache (module) cardinal_pythonlib.dsp (module) cardinal_pythonlib.email.mailboxpurge (module) cardinal_pythonlib.email.sendmail (module) cardinal_pythonlib.ensure_test_executed_correctly (module) cardinal_pythonlib.enumlike (module) cardinal_pythonlib.excel (module) cardinal_pythonlib.exceptions (module) cardinal_pythonlib.extract_text (module) cardinal_pythonlib.file_io (module) cardinal_pythonlib.fileops (module) cardinal_pythonlib.formatting (module) cardinal_pythonlib.hash (module) cardinal_pythonlib.httpconst (module) cardinal_pythonlib.interval (module) cardinal_pythonlib.iterhelp (module) cardinal_pythonlib.json.serialize (module) cardinal_pythonlib.json.typing_helpers (module) cardinal_pythonlib.lang (module) cardinal_pythonlib.lists (module) cardinal_pythonlib.logs (module) cardinal_pythonlib.maths_numpy (module) cardinal_pythonlib.maths_py (module) cardinal_pythonlib.metaclasses (module) cardinal_pythonlib.module_version (module) cardinal_pythonlib.modules (module) cardinal_pythonlib.network (module) cardinal_pythonlib.nhs (module) cardinal_pythonlib.openxml.find_bad_openxml (module) cardinal_pythonlib.openxml.find_recovered_openxml (module) cardinal_pythonlib.openxml.grep_in_openxml (module) cardinal_pythonlib.openxml.pause_process_by_disk_space (module) cardinal_pythonlib.parallel (module) cardinal_pythonlib.platformfunc (module) cardinal_pythonlib.plot (module) cardinal_pythonlib.probability (module) cardinal_pythonlib.process (module) cardinal_pythonlib.profile (module) cardinal_pythonlib.progress (module) cardinal_pythonlib.psychiatry.drugs (module) cardinal_pythonlib.psychiatry.rfunc (module) cardinal_pythonlib.psychiatry.timeline (module) cardinal_pythonlib.psychiatry.treatment_resistant_depression (module) cardinal_pythonlib.randomness (module) cardinal_pythonlib.rate_limiting (module) cardinal_pythonlib.regexfunc (module) cardinal_pythonlib.register_db_with_odbc (module) cardinal_pythonlib.reprfunc (module) cardinal_pythonlib.rnc_db (module) cardinal_pythonlib.rnc_text (module) cardinal_pythonlib.rnc_web (module) cardinal_pythonlib.rounding (module) cardinal_pythonlib.rpm (module) cardinal_pythonlib.run_all_tests (module) cardinal_pythonlib.signalfunc (module) cardinal_pythonlib.sizeformatter (module) cardinal_pythonlib.slurm (module) cardinal_pythonlib.snomed (module) cardinal_pythonlib.sort (module) cardinal_pythonlib.source_reformatting (module) cardinal_pythonlib.sphinxtools (module) cardinal_pythonlib.sql.literals (module) cardinal_pythonlib.sql.sql_grammar (module) cardinal_pythonlib.sql.sql_grammar_factory (module) cardinal_pythonlib.sql.sql_grammar_mssql (module) cardinal_pythonlib.sql.sql_grammar_mysql (module) cardinal_pythonlib.sql.validation (module) cardinal_pythonlib.sqlalchemy.alembic_func (module) cardinal_pythonlib.sqlalchemy.alembic_ops (module) cardinal_pythonlib.sqlalchemy.dialect (module) cardinal_pythonlib.sqlalchemy.engine_func (module) cardinal_pythonlib.sqlalchemy.insert_on_duplicate (module) cardinal_pythonlib.sqlalchemy.list_types (module) cardinal_pythonlib.sqlalchemy.logs (module) cardinal_pythonlib.sqlalchemy.schema (module) cardinal_pythonlib.sqlalchemy.semantic_version_coltype (module) cardinal_pythonlib.sqlalchemy.session (module) cardinal_pythonlib.sqlalchemy.sqla_version (module) cardinal_pythonlib.sqlalchemy.sqlfunc (module) cardinal_pythonlib.sqlalchemy.sqlserver (module) cardinal_pythonlib.sqlalchemy.table_identity (module) cardinal_pythonlib.stringfunc (module) cardinal_pythonlib.subproc (module) cardinal_pythonlib.sysops (module) cardinal_pythonlib.tcpipconst (module) cardinal_pythonlib.tee (module) cardinal_pythonlib.text (module) cardinal_pythonlib.timing (module) cardinal_pythonlib.tools.backup_mysql_database (module) cardinal_pythonlib.tools.convert_athena_ohdsi_codes (module) cardinal_pythonlib.tools.convert_mdb_to_mysql (module) cardinal_pythonlib.tools.estimate_mysql_memory_usage (module) cardinal_pythonlib.tools.list_all_file_extensions (module) cardinal_pythonlib.tools.merge_csv (module) cardinal_pythonlib.tools.pdf_to_booklet (module) cardinal_pythonlib.tools.remove_duplicate_files (module) cardinal_pythonlib.tsv (module) cardinal_pythonlib.typetests (module) cardinal_pythonlib.typing_helpers (module) cardinal_pythonlib.ui (module) cardinal_pythonlib.ui_commandline (module) cardinal_pythonlib.uriconst (module) cardinal_pythonlib.version (module) cardinal_pythonlib.version_string (module) cardinal_pythonlib.winservice (module) cardinal_pythonlib.wsgi.cache_mw (module) cardinal_pythonlib.wsgi.constants (module) cardinal_pythonlib.wsgi.errorreporter_mw (module) cardinal_pythonlib.wsgi.headers_mw (module)

cardinal_pythonlib.wsgi.request_logging_mw (module) cardinal_pythonlib.wsgi.reverse_proxied_mw (module) CaseInsensitiveDict (class in cardinal_pythonlib.dicts) CaseInsensitiveEnumMeta (class in cardinal_pythonlib.enumlike) cause_segfault() (in module cardinal_pythonlib.debugging) cgi_method_is_post() (in module cardinal_pythonlib.rnc_web) cgi_parameter_exists() (in module cardinal_pythonlib.rnc_web) change_column_if_table_exists() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) changed() (cardinal_pythonlib.fileops.FileWatcher method) check_call_process() (in module cardinal_pythonlib.subproc) check_call_verbose() (in module cardinal_pythonlib.subproc) checkbox_checked() (in module cardinal_pythonlib.rnc_web) chmod_r() (in module cardinal_pythonlib.fileops) choice_explanation() (in module cardinal_pythonlib.django.fields.helpers) chown_r() (in module cardinal_pythonlib.fileops) chunks() (in module cardinal_pythonlib.lists) class_attribute_dict() (in module cardinal_pythonlib.classes) class_attribute_names() (in module cardinal_pythonlib.classes) class_attribute_values() (in module cardinal_pythonlib.classes) ClassProperty (class in cardinal_pythonlib.classes) classproperty (class in cardinal_pythonlib.classes) clean_message() (in module cardinal_pythonlib.email.mailboxpurge) close() (cardinal_pythonlib.tee.TeeContextManager method) (cardinal_pythonlib.typing_helpers.Pep249DatabaseConnectionType method) (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType method) close_logs() (cardinal_pythonlib.winservice.ProcessManager method) cmdargs() (in module cardinal_pythonlib.tools.backup_mysql_database) cmdline_quote() (in module cardinal_pythonlib.cmdline) cmdline_quote_posix() (in module cardinal_pythonlib.cmdline) cmdline_split() (in module cardinal_pythonlib.cmdline) coerce_to_date() (in module cardinal_pythonlib.datetimefunc) coerce_to_datetime() (in module cardinal_pythonlib.datetimefunc) coerce_to_pendulum() (in module cardinal_pythonlib.datetimefunc) coerce_to_pendulum_date() (in module cardinal_pythonlib.datetimefunc) coin() (in module cardinal_pythonlib.randomness) column_creation_ddl() (in module cardinal_pythonlib.sqlalchemy.schema) column_exists() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) column_lists_equal() (in module cardinal_pythonlib.sqlalchemy.schema) column_types_equal() (in module cardinal_pythonlib.sqlalchemy.schema) columns_equal() (in module cardinal_pythonlib.sqlalchemy.schema) commit() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.typing_helpers.Pep249DatabaseConnectionType method) compare_python_to_reference_murmur3_32() (in module cardinal_pythonlib.hash) compare_python_to_reference_murmur3_64() (in module cardinal_pythonlib.hash) compile_insert_on_duplicate_key_update() (in module cardinal_pythonlib.sqlalchemy.insert_on_duplicate) CompiledRegexMemory (class in cardinal_pythonlib.regexfunc) component_on_date() (cardinal_pythonlib.interval.Interval method) concatenate() (in module cardinal_pythonlib.fileops) concept_reference() (cardinal_pythonlib.snomed.SnomedConcept method) configure_all_loggers_for_colour() (in module cardinal_pythonlib.logs) configure_logger_for_colour() (in module cardinal_pythonlib.logs) connect() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) connect_to_database_odbc_access() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) connect_to_database_odbc_mysql() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) connect_to_database_odbc_sqlserver() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) connection (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType attribute) ConnectionVendors (class in cardinal_pythonlib.django.django_constants) consume() (in module cardinal_pythonlib.platformfunc) contains() (cardinal_pythonlib.interval.Interval method) contains_c_extension() (in module cardinal_pythonlib.modules) contains_duplicates() (in module cardinal_pythonlib.lists) contains_unquoted_ampersand_dangerous_to_windows() (in module cardinal_pythonlib.platformfunc) contains_unquoted_target() (in module cardinal_pythonlib.platformfunc) ContentType (in module cardinal_pythonlib.httpconst) contiguous() (cardinal_pythonlib.interval.Interval method) convert_anything_to_text() (in module cardinal_pythonlib.extract_text) convert_attrs_to_bool() (in module cardinal_pythonlib.convert) convert_attrs_to_int() (in module cardinal_pythonlib.convert) convert_attrs_to_lowercase() (in module cardinal_pythonlib.convert) convert_attrs_to_uppercase() (in module cardinal_pythonlib.convert) convert_datetime_to_local() (in module cardinal_pythonlib.datetimefunc) convert_datetime_to_utc() (in module cardinal_pythonlib.datetimefunc) convert_doc_to_text() (in module cardinal_pythonlib.extract_text) convert_docx_to_text() (in module cardinal_pythonlib.extract_text) convert_duration() (in module cardinal_pythonlib.interval) convert_for_openpyxl() (in module cardinal_pythonlib.excel) convert_for_pyexcel_ods3() (in module cardinal_pythonlib.excel) convert_html_to_text() (in module cardinal_pythonlib.extract_text) convert_line_endings() (in module cardinal_pythonlib.file_io) convert_odt_to_text() (in module cardinal_pythonlib.extract_text) convert_pdf_to_txt() (in module cardinal_pythonlib.extract_text) convert_rtf_to_text() (in module cardinal_pythonlib.extract_text) convert_sqla_type_for_dialect (in module cardinal_pythonlib.sqlalchemy.schema) convert_to_bool() (in module cardinal_pythonlib.convert) convert_to_foldable() (in module cardinal_pythonlib.tools.pdf_to_booklet) convert_to_int() (in module cardinal_pythonlib.convert) convert_xml_to_text() (in module cardinal_pythonlib.extract_text) CooperativeMeta (class in cardinal_pythonlib.metaclasses) copy() (cardinal_pythonlib.interval.Interval method) (cardinal_pythonlib.interval.IntervalList method) copy_all_logs_to_file() (in module cardinal_pythonlib.logs) copy_root_log_to_file() (in module cardinal_pythonlib.logs) copy_tree_contents() (in module cardinal_pythonlib.fileops) copy_tree_root() (in module cardinal_pythonlib.fileops) copyglob() (in module cardinal_pythonlib.fileops) CorruptedOpenXmlReader (class in cardinal_pythonlib.openxml.find_recovered_openxml) CorruptedZipReader (class in cardinal_pythonlib.openxml.find_recovered_openxml) count_bool() (in module cardinal_pythonlib.lists) count_where() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) create_and_register_access2000_db() (in module cardinal_pythonlib.register_db_with_odbc) create_and_register_access97_db() (in module cardinal_pythonlib.register_db_with_odbc) create_and_register_access_db() (in module cardinal_pythonlib.register_db_with_odbc) create_base64encoded_randomness() (in module cardinal_pythonlib.randomness) create_database_mysql() (in module cardinal_pythonlib.rnc_db) create_fulltext_index() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) create_index() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) create_index_from_fieldspec() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) create_object_from_list() (in module cardinal_pythonlib.rnc_db) create_or_replace_primary_key() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) create_or_update_table() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) create_sp() (in module cardinal_pythonlib.sqlalchemy.alembic_ops) create_sys_dsn() (in module cardinal_pythonlib.register_db_with_odbc) create_user_dsn() (in module cardinal_pythonlib.register_db_with_odbc) create_view() (in module cardinal_pythonlib.sqlalchemy.alembic_ops) CreateSPOp (class in cardinal_pythonlib.sqlalchemy.alembic_ops) CreateViewOp (class in cardinal_pythonlib.sqlalchemy.alembic_ops) csv_to_list_of_dicts() (in module cardinal_pythonlib.rnc_text) csv_to_list_of_fields() (in module cardinal_pythonlib.rnc_text) CSVWriterType (class in cardinal_pythonlib.typing_helpers) ctrl_break_trapper() (in module cardinal_pythonlib.signalfunc) ctrl_c_trapper() (in module cardinal_pythonlib.signalfunc) cumulative_before_during_after() (cardinal_pythonlib.interval.IntervalList method) cumulative_gaps_to() (cardinal_pythonlib.interval.IntervalList method) cumulative_time_on_drug() (in module cardinal_pythonlib.psychiatry.timeline) cumulative_time_to() (cardinal_pythonlib.interval.IntervalList method) cursor() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.typing_helpers.Pep249DatabaseConnectionType method) CustomDocxParagraph (class in cardinal_pythonlib.extract_text) CustomDocxTable (class in cardinal_pythonlib.extract_text) CustomDocxTableCell (class in cardinal_pythonlib.extract_text) CustomDocxTableRow (class in cardinal_pythonlib.extract_text) cut() (cardinal_pythonlib.interval.Interval method)

D

DatabaseSupporter (class in cardinal_pythonlib.rnc_db) datetime2literal_rnc() (in module cardinal_pythonlib.rnc_db) day_night_duration() (cardinal_pythonlib.interval.Interval method) dayspan() (cardinal_pythonlib.interval.Interval static method) daytime() (cardinal_pythonlib.interval.Interval static method) db_exec() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) db_exec_and_commit() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) db_exec_literal() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) db_exec_with_cursor() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) dbinom_raw_log (in module cardinal_pythonlib.rpm) debug() (cardinal_pythonlib.winservice.ProcessManager method) (cardinal_pythonlib.winservice.WindowsService method) debug_form_contents() (in module cardinal_pythonlib.rnc_web) debug_object() (in module cardinal_pythonlib.debugging) (in module cardinal_pythonlib.rnc_db) debug_query() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) debug_query_result() (in module cardinal_pythonlib.rnc_db) debug_sql() (in module cardinal_pythonlib.rnc_db) DebuggingCooperativeMeta (class in cardinal_pythonlib.metaclasses) deduplicate() (in module cardinal_pythonlib.tools.remove_duplicate_files) default() (cardinal_pythonlib.json.serialize.JsonClassEncoder method) delete_by_field() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) delete_elements_by_index() (in module cardinal_pythonlib.lists) delete_files_within_dir() (in module cardinal_pythonlib.fileops) delete_keys() (in module cardinal_pythonlib.dicts) delimit() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (in module cardinal_pythonlib.rnc_db) derived_class_implements_method() (in module cardinal_pythonlib.classes) describe_table() (cardinal_pythonlib.rnc_db.Access class method) (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.rnc_db.Flavour class method) (cardinal_pythonlib.rnc_db.MySQL class method) (cardinal_pythonlib.rnc_db.SQLServer class method) description (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType attribute) dict_diff() (in module cardinal_pythonlib.dicts) dict_to_enum_fn() (in module cardinal_pythonlib.json.serialize) dict_to_map() (in module cardinal_pythonlib.datamapping) dict_to_pendulum() (in module cardinal_pythonlib.json.serialize) dict_to_pendulumdate() (in module cardinal_pythonlib.json.serialize) dictfetchall() (in module cardinal_pythonlib.dbfunc) dictfetchone() (in module cardinal_pythonlib.dbfunc) dictlist_convert_to_bool() (in module cardinal_pythonlib.rnc_text) dictlist_convert_to_datetime() (in module cardinal_pythonlib.rnc_text) dictlist_convert_to_float() (in module cardinal_pythonlib.rnc_text) dictlist_convert_to_int() (in module cardinal_pythonlib.rnc_text) dictlist_convert_to_string() (in module cardinal_pythonlib.rnc_text) dictlist_replace() (in module cardinal_pythonlib.rnc_text)

dictlist_to_tsv() (in module cardinal_pythonlib.tsv) dictlist_wipe_key() (in module cardinal_pythonlib.rnc_text) die() (in module cardinal_pythonlib.exceptions) (in module cardinal_pythonlib.sysops) DisableClientSideCachingMiddleware (class in cardinal_pythonlib.wsgi.cache_mw) do_cprofile() (in module cardinal_pythonlib.profile) document_to_text() (in module cardinal_pythonlib.extract_text) docx_gen_fragments_from_xml_node() (in module cardinal_pythonlib.extract_text) docx_gen_wordwrapped_fragments() (in module cardinal_pythonlib.extract_text) docx_process_table() (in module cardinal_pythonlib.extract_text) docx_table_from_xml_node() (in module cardinal_pythonlib.extract_text) docx_text_from_xml() (in module cardinal_pythonlib.extract_text) docx_text_from_xml_node() (in module cardinal_pythonlib.extract_text) docx_wordwrap_fragments() (in module cardinal_pythonlib.extract_text) DocxFragment (class in cardinal_pythonlib.extract_text) does_row_exist() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) does_sqlatype_merit_fulltext_index() (in module cardinal_pythonlib.sqlalchemy.schema) does_sqlatype_require_index_len() (in module cardinal_pythonlib.sqlalchemy.schema) does_unrtf_support_quiet() (in module cardinal_pythonlib.extract_text) double_quoted() (in module cardinal_pythonlib.snomed) download() (in module cardinal_pythonlib.network) download_if_not_exists() (in module cardinal_pythonlib.buildfunc) drop_column() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) drop_sp() (in module cardinal_pythonlib.sqlalchemy.alembic_ops) drop_table() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) drop_view() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (in module cardinal_pythonlib.sqlalchemy.alembic_ops) DropSPOp (class in cardinal_pythonlib.sqlalchemy.alembic_ops) DropViewOp (class in cardinal_pythonlib.sqlalchemy.alembic_ops) Drug (class in cardinal_pythonlib.psychiatry.drugs) drug_matches_criteria() (in module cardinal_pythonlib.psychiatry.drugs) drug_name_matches_criteria() (in module cardinal_pythonlib.psychiatry.drugs) drug_name_to_generic() (in module cardinal_pythonlib.psychiatry.drugs) drug_names_match_criteria() (in module cardinal_pythonlib.psychiatry.drugs) drug_names_to_generic() (in module cardinal_pythonlib.psychiatry.drugs) drug_timelines() (in module cardinal_pythonlib.psychiatry.timeline) dummy_context_mgr() (in module cardinal_pythonlib.contexts) dummy_jit_integrand_function_with_args() (in module cardinal_pythonlib.rpm) dump_database_object() (in module cardinal_pythonlib.rnc_db) dump_map() (in module cardinal_pythonlib.json.serialize) duration() (cardinal_pythonlib.interval.Interval method) duration_from_iso() (in module cardinal_pythonlib.datetimefunc) duration_in() (cardinal_pythonlib.interval.Interval method) duration_outside_nwh() (cardinal_pythonlib.interval.IntervalList method) duration_outside_uk_normal_working_hours() (cardinal_pythonlib.interval.Interval method) duration_to_iso() (in module cardinal_pythonlib.datetimefunc) durations() (cardinal_pythonlib.interval.IntervalList method)

E

emit() (cardinal_pythonlib.logs.HtmlColorHandler method) end_date() (cardinal_pythonlib.interval.IntervalList method) end_datetime() (cardinal_pythonlib.interval.IntervalList method) ensure_db_open() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) enum_to_dict_fn() (in module cardinal_pythonlib.json.serialize) EnumDict (class in cardinal_pythonlib.enumlike) eof() (cardinal_pythonlib.subproc.AsynchronousFileReader method) error() (cardinal_pythonlib.winservice.ProcessManager method) (cardinal_pythonlib.winservice.WindowsService method) ErrorReportingMiddleware (class in cardinal_pythonlib.wsgi.errorreporter_mw)

escape_newlines() (in module cardinal_pythonlib.text) escape_tabs_newlines() (in module cardinal_pythonlib.text) excel_to_bytes() (in module cardinal_pythonlib.excel) execute() (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType method) executemany() (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType method) exists_locked() (in module cardinal_pythonlib.fileops) extent() (cardinal_pythonlib.interval.IntervalList method) extract_day_of_month (class in cardinal_pythonlib.sqlalchemy.sqlfunc) extract_month (class in cardinal_pythonlib.sqlalchemy.sqlfunc) extract_year (class in cardinal_pythonlib.sqlalchemy.sqlfunc) extract_year_default() (in module cardinal_pythonlib.sqlalchemy.sqlfunc)

F

fail() (in module cardinal_pythonlib.subproc) fail_unknown_dialect() (in module cardinal_pythonlib.sqlalchemy.sqlfunc) fetch() (in module cardinal_pythonlib.buildfunc) fetch_all_objects_from_db() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) fetch_all_objects_from_db_by_pklist() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) fetch_all_objects_from_db_where() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) fetch_column_names() (cardinal_pythonlib.rnc_db.Access class method) (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.rnc_db.Flavour class method) (cardinal_pythonlib.rnc_db.MySQL class method) (cardinal_pythonlib.rnc_db.SQLServer class method) fetch_fieldnames() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) fetch_object_from_db_by_other_field() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) fetch_object_from_db_by_pk() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) fetch_processed_single_clause() (in module cardinal_pythonlib.sqlalchemy.sqlfunc) fetchall() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType method) fetchall_as_dictlist() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) fetchall_with_fieldnames() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) fetchallfirstvalues() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (in module cardinal_pythonlib.dbfunc) fetchmany() (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType method) fetchone() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType method) fetchvalue() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) fielddefsql_from_fieldspec() (cardinal_pythonlib.rnc_db.DatabaseSupporter static method)

fielddefsql_from_fieldspeclist() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) fieldname_from_fieldspec() (cardinal_pythonlib.rnc_db.DatabaseSupporter static method) fieldnames_from_fieldspeclist() (cardinal_pythonlib.rnc_db.DatabaseSupporter static method) fieldspec_subset_by_name() (cardinal_pythonlib.rnc_db.DatabaseSupporter static method) filename_matches_glob() (cardinal_pythonlib.sphinxtools.AutodocIndex static method) FileToAutodocument (class in cardinal_pythonlib.sphinxtools) FileWatcher (class in cardinal_pythonlib.fileops) filter_unique() (in module cardinal_pythonlib.lists) find() (in module cardinal_pythonlib.fileops) find_first() (in module cardinal_pythonlib.fileops) find_line_beginning() (in module cardinal_pythonlib.rnc_text) find_line_containing() (in module cardinal_pythonlib.rnc_text) find_nth() (in module cardinal_pythonlib.stringfunc) first_from_xff() (in module cardinal_pythonlib.wsgi.reverse_proxied_mw) first_interval_ending() (cardinal_pythonlib.interval.IntervalList method) first_interval_starting() (cardinal_pythonlib.interval.IntervalList method) fkg() (in module cardinal_pythonlib.dogpile_cache) fkg_allowing_type_hints() (in module cardinal_pythonlib.dogpile_cache) flatten_list() (in module cardinal_pythonlib.lists) Flavour (class in cardinal_pythonlib.rnc_db) flush() (cardinal_pythonlib.tee.TeeContextManager method) flush_stdout_stderr() (in module cardinal_pythonlib.psychiatry.rfunc) format() (cardinal_pythonlib.logs.HtmlColorFormatter method) format_datetime() (in module cardinal_pythonlib.datetimefunc) formatdt() (in module cardinal_pythonlib.interval) full_datatype_to_mysql() (in module cardinal_pythonlib.rnc_db) fullname (cardinal_pythonlib.winservice.ProcessManager attribute)

G

gap_subset() (cardinal_pythonlib.interval.IntervalList method) gaps() (cardinal_pythonlib.interval.IntervalList method) gen_all_subclasses() (in module cardinal_pythonlib.classes) gen_binary_files_from_urls() (in module cardinal_pythonlib.network) gen_columns_info() (in module cardinal_pythonlib.sqlalchemy.schema) gen_fetchall() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) gen_fetchfirst() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) gen_filenames() (in module cardinal_pythonlib.fileops) gen_files_from_zipfiles() (in module cardinal_pythonlib.file_io) gen_from_stdin() (in module cardinal_pythonlib.openxml.find_bad_openxml) gen_items_from_sql_csv() (in module cardinal_pythonlib.sql.literals) gen_lines_from_binary_files() (in module cardinal_pythonlib.file_io) gen_lines_from_textfiles() (in module cardinal_pythonlib.file_io) gen_lines_without_comments() (in module cardinal_pythonlib.file_io) gen_lower() (in module cardinal_pythonlib.file_io) gen_noncomment_lines() (in module cardinal_pythonlib.file_io) gen_parallel_results_efficiently() (in module cardinal_pythonlib.parallel) gen_part_from_iterables() (in module cardinal_pythonlib.file_io) gen_part_from_line() (in module cardinal_pythonlib.file_io) gen_rows_from_csv_binfiles() (in module cardinal_pythonlib.file_io) gen_textfiles_from_filenames() (in module cardinal_pythonlib.file_io) gen_xml_files_from_docx() (in module cardinal_pythonlib.extract_text) gendicts() (in module cardinal_pythonlib.dbfunc) generate_nhs_number_from_first_9_digits() (in module cardinal_pythonlib.nhs) generate_random_nhs_number() (in module cardinal_pythonlib.nhs) generate_random_string() (in module cardinal_pythonlib.randomness) generic_name (cardinal_pythonlib.psychiatry.drugs.Drug attribute) generic_service_main() (in module cardinal_pythonlib.winservice) GenericHasher (class in cardinal_pythonlib.hash) GenericHmacHasher (class in cardinal_pythonlib.hash) GenericSaltedHasher (class in cardinal_pythonlib.hash) genfirstvalues() (in module cardinal_pythonlib.dbfunc) genrows() (in module cardinal_pythonlib.dbfunc) get() (cardinal_pythonlib.dicts.CaseInsensitiveDict method) (cardinal_pythonlib.dicts.LazyDict method) get_age() (in module cardinal_pythonlib.datetimefunc) get_all_table_details() (cardinal_pythonlib.rnc_db.Access class method) (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.rnc_db.Flavour class method) (cardinal_pythonlib.rnc_db.MySQL class method) (cardinal_pythonlib.rnc_db.SQLServer class method) get_all_table_names() (cardinal_pythonlib.rnc_db.Access class method) (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.rnc_db.Flavour class method) (cardinal_pythonlib.rnc_db.MySQL class method) (cardinal_pythonlib.rnc_db.SQLServer class method) get_athena_concept_relationships() (in module cardinal_pythonlib.athena_ohdsi) get_athena_concepts() (in module cardinal_pythonlib.athena_ohdsi) get_bool() (in module cardinal_pythonlib.rnc_text) get_bool_raw() (in module cardinal_pythonlib.rnc_text) get_bool_relative() (in module cardinal_pythonlib.rnc_text) get_brace_style_log_with_null_handler() (in module cardinal_pythonlib.logs) get_caller_name() (in module cardinal_pythonlib.debugging) get_caller_stack_info() (in module cardinal_pythonlib.debugging) get_case_insensitive_dict_key() (in module cardinal_pythonlib.dicts) get_cgi_fieldstorage_from_wsgi_env() (in module cardinal_pythonlib.rnc_web) get_cgi_parameter_bool() (in module cardinal_pythonlib.rnc_web) get_cgi_parameter_bool_or_default() (in module cardinal_pythonlib.rnc_web) get_cgi_parameter_bool_or_none() (in module cardinal_pythonlib.rnc_web) get_cgi_parameter_datetime() (in module cardinal_pythonlib.rnc_web) get_cgi_parameter_file() (in module cardinal_pythonlib.rnc_web) get_cgi_parameter_filename_and_file() (in module cardinal_pythonlib.rnc_web) get_cgi_parameter_float() (in module cardinal_pythonlib.rnc_web) get_cgi_parameter_int() (in module cardinal_pythonlib.rnc_web) get_cgi_parameter_list() (in module cardinal_pythonlib.rnc_web) get_cgi_parameter_str() (in module cardinal_pythonlib.rnc_web) get_cgi_parameter_str_or_none() (in module cardinal_pythonlib.rnc_web) get_chardet_encoding() (in module cardinal_pythonlib.extract_text) get_class_name_from_frame() (in module cardinal_pythonlib.debugging) get_cmd_output() (in module cardinal_pythonlib.extract_text) get_cmd_output_from_stdin() (in module cardinal_pythonlib.extract_text) get_colour_handler() (in module cardinal_pythonlib.logs) get_column_info() (in module cardinal_pythonlib.sqlalchemy.schema) get_column_names() (in module cardinal_pythonlib.sqlalchemy.schema) get_column_spec() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) get_column_type() (cardinal_pythonlib.rnc_db.Access class method) (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.rnc_db.Flavour class method) (cardinal_pythonlib.rnc_db.MySQL class method) (cardinal_pythonlib.rnc_db.SQLServer class method) (in module cardinal_pythonlib.sqlalchemy.schema) get_comment() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.rnc_db.Flavour class method) (cardinal_pythonlib.rnc_db.MySQL class method) get_config_bool_option() (in module cardinal_pythonlib.configfiles) get_config_multiline_option() (in module cardinal_pythonlib.configfiles) get_config_parameter() (in module cardinal_pythonlib.configfiles) get_config_parameter_boolean() (in module cardinal_pythonlib.configfiles) get_config_parameter_loglevel() (in module cardinal_pythonlib.configfiles) get_config_parameter_multiline() (in module cardinal_pythonlib.configfiles) get_config_string_option() (in module cardinal_pythonlib.configfiles) get_current_and_head_revision() (in module cardinal_pythonlib.sqlalchemy.alembic_func) get_current_revision() (in module cardinal_pythonlib.sqlalchemy.alembic_func) get_datatype() (cardinal_pythonlib.rnc_db.Access class method) (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.rnc_db.Flavour class method) (cardinal_pythonlib.rnc_db.MySQL class method) (cardinal_pythonlib.rnc_db.SQLServer class method) get_datetime() (in module cardinal_pythonlib.rnc_text) get_dialect() (in module cardinal_pythonlib.sqlalchemy.dialect) get_dialect_from_name() (in module cardinal_pythonlib.sqlalchemy.dialect) get_dialect_name() (in module cardinal_pythonlib.sqlalchemy.dialect) get_directory_contents_size() (in module cardinal_pythonlib.fileops) get_drug() (in module cardinal_pythonlib.psychiatry.drugs)

get_duration_h_m() (in module cardinal_pythonlib.datetimefunc) get_effective_int_pk_col() (in module cardinal_pythonlib.sqlalchemy.schema) get_email_domain() (in module cardinal_pythonlib.email.sendmail) get_engine_from_session() (in module cardinal_pythonlib.sqlalchemy.session) get_envvar_or_die() (in module cardinal_pythonlib.sysops) get_expr() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) get_external_command_output() (in module cardinal_pythonlib.process) get_fieldnames_from_cursor() (in module cardinal_pythonlib.dbfunc) get_file_contents() (in module cardinal_pythonlib.extract_text) get_file_contents_text() (in module cardinal_pythonlib.extract_text) get_filelikeobject() (in module cardinal_pythonlib.extract_text) get_float() (in module cardinal_pythonlib.rnc_text) get_float_or_none() (in module cardinal_pythonlib.rnc_web) get_float_raw() (in module cardinal_pythonlib.rnc_text) get_float_relative() (in module cardinal_pythonlib.rnc_text) get_formatter_report() (in module cardinal_pythonlib.logs) get_grammar() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) get_handler_report() (in module cardinal_pythonlib.logs) get_head_revision_from_alembic() (in module cardinal_pythonlib.sqlalchemy.alembic_func) get_int() (in module cardinal_pythonlib.rnc_text) get_int_or_none() (in module cardinal_pythonlib.rnc_web) get_int_raw() (in module cardinal_pythonlib.rnc_text) get_int_relative() (in module cardinal_pythonlib.rnc_text) get_join_constraint() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) get_join_op() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) get_lines_from_to() (in module cardinal_pythonlib.rnc_text) get_lines_without_comments() (in module cardinal_pythonlib.file_io) get_list_of_sql_string_literals_from_quoted_csv() (in module cardinal_pythonlib.sqlalchemy.schema) get_log_report() (in module cardinal_pythonlib.logs) get_log_with_null_handler() (in module cardinal_pythonlib.logs) get_monochrome_handler() (in module cardinal_pythonlib.logs) get_mysql_vars() (in module cardinal_pythonlib.tools.estimate_mysql_memory_usage) get_namespace() (in module cardinal_pythonlib.dogpile_cache) get_now_localtz_pendulum() (in module cardinal_pythonlib.datetimefunc) get_now_utc_datetime() (in module cardinal_pythonlib.datetimefunc) get_now_utc_notz_datetime() (in module cardinal_pythonlib.datetimefunc) get_now_utc_pendulum() (in module cardinal_pythonlib.datetimefunc) get_open_filename() (in module cardinal_pythonlib.ui) get_overlaps() (cardinal_pythonlib.interval.IntervalList method) get_page_count() (in module cardinal_pythonlib.tools.pdf_to_booklet) get_pendulum_duration_nonyear_nonmonth_seconds() (in module cardinal_pythonlib.datetimefunc) get_pipe_series_output() (in module cardinal_pythonlib.process) get_pk_colnames() (in module cardinal_pythonlib.sqlalchemy.schema) get_pk_of_last_insert() (in module cardinal_pythonlib.rnc_db) get_png_data_url() (in module cardinal_pythonlib.rnc_web) get_png_img_html() (in module cardinal_pythonlib.rnc_web) get_preparer() (in module cardinal_pythonlib.sqlalchemy.dialect) get_python_repr() (in module cardinal_pythonlib.psychiatry.rfunc) get_python_repr_of_type() (in module cardinal_pythonlib.psychiatry.rfunc) get_result_column() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) get_safe_url_from_engine() (in module cardinal_pythonlib.sqlalchemy.session) get_safe_url_from_session() (in module cardinal_pythonlib.sqlalchemy.session) get_safe_url_from_url() (in module cardinal_pythonlib.sqlalchemy.session) get_save_as_filename() (in module cardinal_pythonlib.ui) get_select_statement() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) get_single_int_autoincrement_colname() (in module cardinal_pythonlib.sqlalchemy.schema) get_single_int_pk_colname() (in module cardinal_pythonlib.sqlalchemy.schema) get_sorted_source_files() (cardinal_pythonlib.sphinxtools.AutodocIndex method) get_sql_insert() (in module cardinal_pythonlib.rnc_db) get_sql_insert_or_update() (in module cardinal_pythonlib.rnc_db) get_sql_insert_without_first_field() (in module cardinal_pythonlib.rnc_db) get_sql_select_all_fields_by_key() (in module cardinal_pythonlib.rnc_db) get_sql_select_all_non_pk_fields_by_pk() (in module cardinal_pythonlib.rnc_db) get_sql_update_by_first_field() (in module cardinal_pythonlib.rnc_db) get_sqla_coltype_from_dialect_str (in module cardinal_pythonlib.sqlalchemy.schema) get_sqlserver_product_version() (in module cardinal_pythonlib.sqlalchemy.engine_func) get_string() (in module cardinal_pythonlib.rnc_text) get_string_relative() (in module cardinal_pythonlib.rnc_text) get_system_variable() (cardinal_pythonlib.rnc_db.Flavour class method) (cardinal_pythonlib.rnc_db.MySQL class method) get_table_names() (in module cardinal_pythonlib.sqlalchemy.schema) get_table_spec() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) get_tz_local() (in module cardinal_pythonlib.datetimefunc) get_tz_utc() (in module cardinal_pythonlib.datetimefunc) get_unicode_category_strings() (in module cardinal_pythonlib.text) get_unicode_characters() (in module cardinal_pythonlib.text) get_view_names() (in module cardinal_pythonlib.sqlalchemy.schema) get_what_follows() (in module cardinal_pythonlib.rnc_text) get_what_follows_raw() (in module cardinal_pythonlib.rnc_text) get_where_clause() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) get_where_expr() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) getconfigvar_escaped() (in module cardinal_pythonlib.rnc_web) getenv_escaped() (in module cardinal_pythonlib.rnc_web) giant_text_sqltype() (in module cardinal_pythonlib.sqlalchemy.schema) git_clone() (in module cardinal_pythonlib.buildfunc) gunzip_string() (in module cardinal_pythonlib.compression) gut_message() (in module cardinal_pythonlib.email.mailboxpurge) gzip_string() (in module cardinal_pythonlib.compression)

H

hack_in_mssql_xml_type() (in module cardinal_pythonlib.sqlalchemy.schema) hash() (cardinal_pythonlib.hash.GenericHasher method) (cardinal_pythonlib.hash.GenericHmacHasher method) (cardinal_pythonlib.hash.GenericSaltedHasher method) hash32() (in module cardinal_pythonlib.hash) hash64() (in module cardinal_pythonlib.hash) HashableDict (class in cardinal_pythonlib.dicts) HeaderModifyMode (class in cardinal_pythonlib.wsgi.headers_mw) hex_xformat_decode() (in module cardinal_pythonlib.convert) hex_xformat_encode() (in module cardinal_pythonlib.convert)

highpass_filter() (in module cardinal_pythonlib.dsp) HmacMD5Hasher (class in cardinal_pythonlib.hash) HmacSHA256Hasher (class in cardinal_pythonlib.hash) HmacSHA512Hasher (class in cardinal_pythonlib.hash) html_result() (in module cardinal_pythonlib.rnc_web) html_table_from_query() (in module cardinal_pythonlib.rnc_web) HtmlColorFormatter (class in cardinal_pythonlib.logs) HtmlColorHandler (class in cardinal_pythonlib.logs) HttpMethod (class in cardinal_pythonlib.httpconst) HttpStatus (class in cardinal_pythonlib.httpconst) human2bytes() (in module cardinal_pythonlib.sizeformatter)

I

if_sqlserver_disable_constraints() (in module cardinal_pythonlib.sqlalchemy.sqlserver) if_sqlserver_disable_constraints_triggers() (in module cardinal_pythonlib.sqlalchemy.sqlserver) if_sqlserver_disable_triggers() (in module cardinal_pythonlib.sqlalchemy.sqlserver) import_submodules() (in module cardinal_pythonlib.modules) incbeta (in module cardinal_pythonlib.rpm) index_content() (cardinal_pythonlib.sphinxtools.AutodocIndex method) index_exists() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (in module cardinal_pythonlib.sqlalchemy.schema) index_filename_rel_other_index() (cardinal_pythonlib.sphinxtools.AutodocIndex method) index_filename_rel_project_root (cardinal_pythonlib.sphinxtools.AutodocIndex attribute) index_list_for_sort_order() (in module cardinal_pythonlib.lists) index_lists_equal() (in module cardinal_pythonlib.sqlalchemy.schema) indexes_equal() (in module cardinal_pythonlib.sqlalchemy.schema) info() (cardinal_pythonlib.winservice.ProcessManager method) (cardinal_pythonlib.winservice.WindowsService method) initdict_to_instance() (in module cardinal_pythonlib.json.serialize) insert_multiple_records() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) insert_object_into_db_pk_known() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) insert_object_into_db_pk_unknown() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) insert_on_duplicate() (in module cardinal_pythonlib.sqlalchemy.insert_on_duplicate) insert_record() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) insert_record_by_dict() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) insert_record_by_fieldspecs_with_values() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) InsertOnDuplicate (class in cardinal_pythonlib.sqlalchemy.insert_on_duplicate) instance_to_initdict_simple() (in module cardinal_pythonlib.json.serialize) instance_to_initdict_stripping_underscores() (in module cardinal_pythonlib.json.serialize) intersection() (cardinal_pythonlib.interval.Interval method) Interval (class in cardinal_pythonlib.interval) IntervalList (class in cardinal_pythonlib.interval) IntListType (class in cardinal_pythonlib.sqlalchemy.list_types) inv_logistic() (in module cardinal_pythonlib.maths_numpy) invoke_for_target() (cardinal_pythonlib.sqlalchemy.alembic_ops.ReversibleOp class method) ip_addresses_from_xff() (in module cardinal_pythonlib.wsgi.reverse_proxied_mw) is_1() (in module cardinal_pythonlib.rnc_web) is_builtin_module() (in module cardinal_pythonlib.modules)

is_c_extension() (in module cardinal_pythonlib.modules) is_email_valid() (in module cardinal_pythonlib.email.sendmail) is_empty() (cardinal_pythonlib.interval.IntervalList method) is_empty_string() (in module cardinal_pythonlib.rnc_text) is_false() (in module cardinal_pythonlib.typetests) is_good_answer() (cardinal_pythonlib.httpconst.HttpStatus class method) is_integer() (in module cardinal_pythonlib.typetests) is_line_in_file() (in module cardinal_pythonlib.file_io) is_mysql() (in module cardinal_pythonlib.sqlalchemy.engine_func) is_normal_uk_working_day() (in module cardinal_pythonlib.interval) is_open() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) is_openxml_good() (in module cardinal_pythonlib.openxml.find_bad_openxml) is_python (cardinal_pythonlib.sphinxtools.FileToAutodocument attribute) is_quoted() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) is_read_only() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.rnc_db.MySQL class method) is_running() (in module cardinal_pythonlib.openxml.pause_process_by_disk_space) is_saturday() (in module cardinal_pythonlib.interval) is_sqlatype_binary() (in module cardinal_pythonlib.sqlalchemy.schema) is_sqlatype_date() (in module cardinal_pythonlib.sqlalchemy.schema) is_sqlatype_integer() (in module cardinal_pythonlib.sqlalchemy.schema) is_sqlatype_numeric() (in module cardinal_pythonlib.sqlalchemy.schema) is_sqlatype_string() (in module cardinal_pythonlib.sqlalchemy.schema) is_sqlatype_text_of_length_at_least() (in module cardinal_pythonlib.sqlalchemy.schema) is_sqlatype_text_over_one_char() (in module cardinal_pythonlib.sqlalchemy.schema) is_sqlserver() (in module cardinal_pythonlib.sqlalchemy.engine_func) is_sqlserver_2008_or_later() (in module cardinal_pythonlib.sqlalchemy.engine_func) is_sunday() (in module cardinal_pythonlib.interval) is_test_nhs_number() (in module cardinal_pythonlib.nhs) is_text_extractor_available() (in module cardinal_pythonlib.extract_text) is_uk_bank_holiday() (in module cardinal_pythonlib.interval) is_valid_nhs_number() (in module cardinal_pythonlib.nhs) is_valid_png() (in module cardinal_pythonlib.rnc_web) is_weekend() (in module cardinal_pythonlib.interval)

J

jit_integrand_function_with_args() (in module cardinal_pythonlib.rpm) json_class_decoder_hook() (in module cardinal_pythonlib.json.serialize) json_decode() (in module cardinal_pythonlib.json.serialize)

json_encode() (in module cardinal_pythonlib.json.serialize) JsonClassEncoder (class in cardinal_pythonlib.json.serialize) JsonDescriptor (class in cardinal_pythonlib.json.serialize)

K

keys_descriptions_from_enum() (in module cardinal_pythonlib.enumlike) kill_child_processes() (in module cardinal_pythonlib.subproc)

kill_proc_tree() (in module cardinal_pythonlib.process) kw_fkg_allowing_type_hints() (in module cardinal_pythonlib.dogpile_cache) kwargs_to_initdict() (in module cardinal_pythonlib.json.serialize)

L

lastrowid (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType attribute) launch_cambridge_hphi() (in module cardinal_pythonlib.slurm) launch_external_file() (in module cardinal_pythonlib.process) launch_slurm() (in module cardinal_pythonlib.slurm) LazyButHonestDict (class in cardinal_pythonlib.dicts) LazyDict (class in cardinal_pythonlib.dicts) list() (cardinal_pythonlib.interval.IntervalList method) list_file_extensions() (in module cardinal_pythonlib.tools.list_all_file_extensions) ln() (in module cardinal_pythonlib.probability) localize_sql() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) log() (cardinal_pythonlib.logs.BraceStyleAdapter method) (cardinal_pythonlib.wsgi.request_logging_mw.RequestLoggingMiddleware method) log10() (in module cardinal_pythonlib.probability) log_bayes_posterior() (in module cardinal_pythonlib.probability)

log_likelihood_ratio_from_p() (in module cardinal_pythonlib.probability) log_odds_from_1_in_n() (in module cardinal_pythonlib.probability) log_odds_from_probability() (in module cardinal_pythonlib.probability) log_posterior_odds() (in module cardinal_pythonlib.probability) log_posterior_odds_from_bool_d_pdh_pdnh() (in module cardinal_pythonlib.probability) log_posterior_odds_from_pdh_pdnh() (in module cardinal_pythonlib.probability) log_probability_from_log_odds() (in module cardinal_pythonlib.probability) logistic() (in module cardinal_pythonlib.maths_numpy) longest_duration() (cardinal_pythonlib.interval.IntervalList method) longest_interval() (cardinal_pythonlib.interval.IntervalList method) LowerCaseAutoStrEnum (class in cardinal_pythonlib.enumlike) LowerCaseAutoStrEnumMeta (class in cardinal_pythonlib.enumlike) LowerCaseAutoStringObject (class in cardinal_pythonlib.enumlike) lowpass_filter() (in module cardinal_pythonlib.dsp)

M

main() (cardinal_pythonlib.winservice.WindowsService method) (in module cardinal_pythonlib.email.sendmail) (in module cardinal_pythonlib.extract_text) (in module cardinal_pythonlib.hash) (in module cardinal_pythonlib.openxml.find_bad_openxml) (in module cardinal_pythonlib.openxml.find_recovered_openxml) (in module cardinal_pythonlib.openxml.grep_in_openxml) (in module cardinal_pythonlib.openxml.pause_process_by_disk_space) (in module cardinal_pythonlib.tools.backup_mysql_database) (in module cardinal_pythonlib.tools.convert_athena_ohdsi_codes) (in module cardinal_pythonlib.tools.estimate_mysql_memory_usage) (in module cardinal_pythonlib.tools.list_all_file_extensions) (in module cardinal_pythonlib.tools.merge_csv) (in module cardinal_pythonlib.tools.pdf_to_booklet) (in module cardinal_pythonlib.tools.remove_duplicate_files) main_only_quicksetup_rootlogger() (in module cardinal_pythonlib.logs) make_bigint_autoincrement_column() (in module cardinal_pythonlib.sqlalchemy.schema) make_blank_pdf() (in module cardinal_pythonlib.tools.pdf_to_booklet) make_copy_paste_env() (in module cardinal_pythonlib.buildfunc) make_email() (in module cardinal_pythonlib.email.sendmail) make_grammar() (in module cardinal_pythonlib.sql.sql_grammar_factory) make_instance_to_initdict() (in module cardinal_pythonlib.json.serialize) make_mysql_url() (in module cardinal_pythonlib.sqlalchemy.session) make_semantic_version() (in module cardinal_pythonlib.sqlalchemy.semantic_version_coltype) make_sqlite_url() (in module cardinal_pythonlib.sqlalchemy.session) make_table() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) make_tsv_row() (in module cardinal_pythonlib.tsv) make_urls_hyperlinks() (in module cardinal_pythonlib.rnc_web) mangle_unicode_to_ascii() (in module cardinal_pythonlib.stringfunc) map_keys_to_values() (in module cardinal_pythonlib.dicts) map_value() (in module cardinal_pythonlib.datamapping) mapped_repr() (in module cardinal_pythonlib.reprfunc)

mapped_repr_stripping_underscores() (in module cardinal_pythonlib.reprfunc) MapType (class in cardinal_pythonlib.argparse_func) max_consecutive_days() (cardinal_pythonlib.interval.IntervalList method) MD5Hasher (class in cardinal_pythonlib.hash) mean() (in module cardinal_pythonlib.maths_py) merge_csv() (in module cardinal_pythonlib.tools.merge_csv) merge_dicts() (in module cardinal_pythonlib.dicts) merge_two_dicts() (in module cardinal_pythonlib.dicts) message_is_binary() (in module cardinal_pythonlib.email.mailboxpurge) messages (cardinal_pythonlib.typing_helpers.Pep249DatabaseConnectionType attribute) (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType attribute) methodcaller_nonesort (class in cardinal_pythonlib.sort) MimeType (class in cardinal_pythonlib.httpconst) mimic_user_input() (in module cardinal_pythonlib.subproc) MinType (class in cardinal_pythonlib.sort) mixture (cardinal_pythonlib.psychiatry.drugs.Drug attribute) mkdir_p() (in module cardinal_pythonlib.fileops) modify_column_if_table_exists() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) module_semantic_version() (in module cardinal_pythonlib.module_version) module_version_string() (in module cardinal_pythonlib.module_version) monkeypatch_TableClause() (in module cardinal_pythonlib.sqlalchemy.insert_on_duplicate) move_to() (cardinal_pythonlib.openxml.find_recovered_openxml.CorruptedZipReader method) moveglob() (in module cardinal_pythonlib.fileops) mssql_get_pk_index_name() (in module cardinal_pythonlib.sqlalchemy.schema) mssql_table_has_ft_index() (in module cardinal_pythonlib.sqlalchemy.schema) mssql_transaction_count() (in module cardinal_pythonlib.sqlalchemy.schema) multikey_fkg_allowing_type_hints() (in module cardinal_pythonlib.dogpile_cache) multiple_replace() (in module cardinal_pythonlib.stringfunc) MultiTimer (class in cardinal_pythonlib.timing) MultiTimerContext (class in cardinal_pythonlib.timing) murmur3_64() (in module cardinal_pythonlib.hash) murmur3_x86_32() (in module cardinal_pythonlib.hash) MySQL (class in cardinal_pythonlib.rnc_db)

N

n_permutations() (in module cardinal_pythonlib.maths_py) n_weekends() (cardinal_pythonlib.interval.Interval method) (cardinal_pythonlib.interval.IntervalList method) name_matches() (cardinal_pythonlib.psychiatry.drugs.Drug method) natural_keys() (in module cardinal_pythonlib.sort) necessary() (cardinal_pythonlib.wsgi.reverse_proxied_mw.ReverseProxiedConfig method) next() (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType method) nextset() (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType method) nhs_check_digit() (in module cardinal_pythonlib.nhs)

nhs_number_from_text_or_none() (in module cardinal_pythonlib.nhs) nice_call() (in module cardinal_pythonlib.process) NoDatabaseError nonnegative_int() (in module cardinal_pythonlib.argparse_func) normal_round_float() (in module cardinal_pythonlib.maths_py) normal_round_int() (in module cardinal_pythonlib.maths_py) normalized_frequency() (in module cardinal_pythonlib.dsp) notch_filter() (in module cardinal_pythonlib.dsp) num_dp_from_decimal() (in module cardinal_pythonlib.rounding) number_to_dp() (in module cardinal_pythonlib.rnc_web)

O

obj_with_no_args_to_init_dict() (in module cardinal_pythonlib.json.serialize) odds_from_probability() (in module cardinal_pythonlib.probability) open_logs() (cardinal_pythonlib.winservice.ProcessManager method) option_selected() (in module cardinal_pythonlib.rnc_web)

ordered_repr() (in module cardinal_pythonlib.reprfunc) OrderedNamespace (class in cardinal_pythonlib.enumlike) output_csv() (in module cardinal_pythonlib.rnc_text) output_length() (cardinal_pythonlib.hash.GenericHasher method) overlaps() (cardinal_pythonlib.interval.Interval method)

P

page_sequence() (in module cardinal_pythonlib.tools.pdf_to_booklet) parse_zip() (in module cardinal_pythonlib.openxml.grep_in_openxml) PasswordPromptAction (class in cardinal_pythonlib.tools.convert_mdb_to_mysql) pdb_run() (in module cardinal_pythonlib.debugging) pdf_result() (in module cardinal_pythonlib.rnc_web) pendulum_date_to_datetime_date() (in module cardinal_pythonlib.datetimefunc) pendulum_duration_from_isodate_duration() (in module cardinal_pythonlib.datetimefunc) pendulum_duration_from_timedelta() (in module cardinal_pythonlib.datetimefunc) pendulum_time_to_datetime_time() (in module cardinal_pythonlib.datetimefunc) pendulum_to_datetime() (in module cardinal_pythonlib.datetimefunc) pendulum_to_datetime_stripping_tz() (in module cardinal_pythonlib.datetimefunc) pendulum_to_dict() (in module cardinal_pythonlib.json.serialize) pendulum_to_utc_datetime_without_tz() (in module cardinal_pythonlib.datetimefunc) pendulumdate_to_dict() (in module cardinal_pythonlib.json.serialize) Pep249DatabaseConnectionType (class in cardinal_pythonlib.typing_helpers) Pep249DatabaseCursorType (class in cardinal_pythonlib.typing_helpers) percentage() (in module cardinal_pythonlib.argparse_func) pick_from_probabilities() (in module cardinal_pythonlib.maths_numpy) ping() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (in module cardinal_pythonlib.network) png_img_html_from_pyplot_figure() (in module cardinal_pythonlib.plot) pop() (cardinal_pythonlib.dicts.CaseInsensitiveDict method) Ports (class in cardinal_pythonlib.tcpipconst) positive_int() (in module cardinal_pythonlib.argparse_func) posterior_odds() (in module cardinal_pythonlib.probability) pre_disable_sqlalchemy_extra_echo_log() (in module cardinal_pythonlib.sqlalchemy.logs) prefix_dict_keys() (in module cardinal_pythonlib.dicts) preserve_cwd() (in module cardinal_pythonlib.fileops) print_equivalent_opcs_codes() (in module cardinal_pythonlib.tools.convert_athena_ohdsi_codes) print_report_on_all_logs() (in module cardinal_pythonlib.logs) print_result_for_plain_cgi_script() (in module cardinal_pythonlib.rnc_web) print_result_for_plain_cgi_script_from_tuple() (in module cardinal_pythonlib.rnc_web)

print_utf8() (in module cardinal_pythonlib.rnc_web) probability_from_log_odds() (in module cardinal_pythonlib.probability) probability_from_log_prob() (in module cardinal_pythonlib.probability) probability_from_odds() (in module cardinal_pythonlib.probability) process() (cardinal_pythonlib.logs.BraceStyleAdapter method) process_bind_param() (cardinal_pythonlib.sqlalchemy.list_types.IntListType method) (cardinal_pythonlib.sqlalchemy.list_types.StringListType method) (cardinal_pythonlib.sqlalchemy.semantic_version_coltype.SemanticVersionColType method) process_file() (in module cardinal_pythonlib.openxml.find_recovered_openxml) process_literal_param() (cardinal_pythonlib.sqlalchemy.list_types.IntListType method) (cardinal_pythonlib.sqlalchemy.list_types.StringListType method) (cardinal_pythonlib.sqlalchemy.semantic_version_coltype.SemanticVersionColType method) process_openxml_file() (in module cardinal_pythonlib.openxml.find_bad_openxml) process_result_value() (cardinal_pythonlib.sqlalchemy.list_types.IntListType method) (cardinal_pythonlib.sqlalchemy.list_types.StringListType method) (cardinal_pythonlib.sqlalchemy.semantic_version_coltype.SemanticVersionColType method) ProcessDetails (class in cardinal_pythonlib.winservice) ProcessManager (class in cardinal_pythonlib.winservice) produce_csv_output() (in module cardinal_pythonlib.rnc_text) product_dict() (in module cardinal_pythonlib.iterhelp) purge() (in module cardinal_pythonlib.fileops) pushd() (in module cardinal_pythonlib.fileops) pygments_language (cardinal_pythonlib.sphinxtools.FileToAutodocument attribute) pymmh3_hash128() (in module cardinal_pythonlib.hash) pymmh3_hash128_x64() (in module cardinal_pythonlib.hash) pymmh3_hash128_x86() (in module cardinal_pythonlib.hash) pymmh3_hash64() (in module cardinal_pythonlib.hash) python_module_name (cardinal_pythonlib.sphinxtools.FileToAutodocument attribute) python_type (cardinal_pythonlib.sqlalchemy.list_types.IntListType attribute) (cardinal_pythonlib.sqlalchemy.list_types.StringListType attribute) (cardinal_pythonlib.sqlalchemy.semantic_version_coltype.SemanticVersionColType attribute) PythonProcessor (class in cardinal_pythonlib.source_reformatting)

Q

quote_identifier() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) (in module cardinal_pythonlib.sqlalchemy.dialect)

quote_identifier_if_required() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method)

R

raise_if_attr_blank() (in module cardinal_pythonlib.typetests) random_random() (in module cardinal_pythonlib.randomness) range_roundable_up_to() (in module cardinal_pythonlib.rounding) range_truncatable_to() (in module cardinal_pythonlib.rounding) rate_limited() (in module cardinal_pythonlib.rate_limiting) RawDescriptionArgumentDefaultsHelpFormatter (class in cardinal_pythonlib.argparse_func) read_config_multiline_options() (in module cardinal_pythonlib.configfiles) read_config_string_options() (in module cardinal_pythonlib.configfiles) recover_info_from_exception() (in module cardinal_pythonlib.exceptions) reformat_python_docstrings() (in module cardinal_pythonlib.source_reformatting) regex (cardinal_pythonlib.psychiatry.drugs.Drug attribute), [1] regex_text (cardinal_pythonlib.psychiatry.drugs.Drug attribute) regex_to_sql_like() (cardinal_pythonlib.psychiatry.drugs.Drug static method) register_access_db() (in module cardinal_pythonlib.register_db_with_odbc) register_class_for_json() (in module cardinal_pythonlib.json.serialize) register_enum_for_json() (in module cardinal_pythonlib.json.serialize) register_for_json() (in module cardinal_pythonlib.json.serialize) relative_filename_within_dir() (in module cardinal_pythonlib.fileops) remove_all_logger_handlers() (in module cardinal_pythonlib.logs) remove_collation() (in module cardinal_pythonlib.sqlalchemy.schema) remove_exponent_from_decimal() (in module cardinal_pythonlib.rounding) remove_gzip_timestamp() (in module cardinal_pythonlib.file_io) remove_overlap() (cardinal_pythonlib.interval.IntervalList method) rename_key() (in module cardinal_pythonlib.dicts) rename_keys() (in module cardinal_pythonlib.dicts) rename_keys_in_dict() (in module cardinal_pythonlib.dicts) rename_table() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) replace() (cardinal_pythonlib.sqlalchemy.alembic_ops.ReversibleOp class method) replace_in_file() (in module cardinal_pythonlib.file_io) replace_in_list() (in module cardinal_pythonlib.stringfunc) replace_multiple_in_file() (in module cardinal_pythonlib.file_io) replace_nl_with_html_br() (in module cardinal_pythonlib.rnc_web) report() (cardinal_pythonlib.timing.MultiTimer method) report_hit_filename() (in module cardinal_pythonlib.openxml.grep_in_openxml) report_line() (in module cardinal_pythonlib.openxml.grep_in_openxml) report_miss_filename() (in module cardinal_pythonlib.openxml.grep_in_openxml) repr_parameter() (in module cardinal_pythonlib.dogpile_cache) repr_result() (in module cardinal_pythonlib.reprfunc) RequestLoggingMiddleware (class in cardinal_pythonlib.wsgi.request_logging_mw) require() (in module cardinal_pythonlib.tools.pdf_to_booklet) require_debian_packages() (in module cardinal_pythonlib.platformfunc) require_executable() (in module cardinal_pythonlib.fileops) require_text_extractor() (in module cardinal_pythonlib.extract_text)

requires_quoting() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) reset() (cardinal_pythonlib.timing.MultiTimer method) reset_logformat() (in module cardinal_pythonlib.logs) reset_logformat_timestamped() (in module cardinal_pythonlib.logs) reverse() (cardinal_pythonlib.sqlalchemy.alembic_ops.CreateSPOp method) (cardinal_pythonlib.sqlalchemy.alembic_ops.CreateViewOp method) (cardinal_pythonlib.sqlalchemy.alembic_ops.DropSPOp method) (cardinal_pythonlib.sqlalchemy.alembic_ops.DropViewOp method) (cardinal_pythonlib.sqlalchemy.alembic_ops.ReversibleOp method) reversedict() (in module cardinal_pythonlib.dicts) ReverseProxiedConfig (class in cardinal_pythonlib.wsgi.reverse_proxied_mw) ReverseProxiedMiddleware (class in cardinal_pythonlib.wsgi.reverse_proxied_mw) ReversibleOp (class in cardinal_pythonlib.sqlalchemy.alembic_ops) rewrite_file() (cardinal_pythonlib.source_reformatting.PythonProcessor method) rmglob() (in module cardinal_pythonlib.fileops) rmtree() (in module cardinal_pythonlib.fileops) rollback() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (cardinal_pythonlib.typing_helpers.Pep249DatabaseConnectionType method) root_path() (in module cardinal_pythonlib.fileops) rotate_even_pages_180() (in module cardinal_pythonlib.tools.pdf_to_booklet) round_half_up() (in module cardinal_pythonlib.rounding) round_sf() (in module cardinal_pythonlib.maths_py) rowcount (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType attribute) rownumber (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType attribute) rpm_probabilities_successes_failures() (in module cardinal_pythonlib.rpm) rpm_probabilities_successes_failures_fast() (in module cardinal_pythonlib.rpm) rpm_probabilities_successes_failures_twochoice_fast() (in module cardinal_pythonlib.rpm) rpm_probabilities_successes_totals() (in module cardinal_pythonlib.rpm) rst_content() (cardinal_pythonlib.sphinxtools.FileToAutodocument method) rst_dir (cardinal_pythonlib.sphinxtools.FileToAutodocument attribute) rst_filename_rel_autodoc_index() (cardinal_pythonlib.sphinxtools.FileToAutodocument method) rst_filename_rel_project_root (cardinal_pythonlib.sphinxtools.FileToAutodocument attribute) rst_underline() (in module cardinal_pythonlib.sphinxtools) rstrip_all_lines() (in module cardinal_pythonlib.extract_text) run() (cardinal_pythonlib.subproc.AsynchronousFileReader method) (in module cardinal_pythonlib.buildfunc) (in module cardinal_pythonlib.tools.pdf_to_booklet) run_debug() (cardinal_pythonlib.winservice.WindowsService method) run_multiple_processes() (in module cardinal_pythonlib.subproc) run_processes() (cardinal_pythonlib.winservice.WindowsService method) running_under_docker() (in module cardinal_pythonlib.docker)

S

safe_logit() (in module cardinal_pythonlib.maths_py) saturdays_of_weekends() (cardinal_pythonlib.interval.Interval method) save_object_to_db() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) scroll() (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType method) SemanticVersionColType (class in cardinal_pythonlib.sqlalchemy.semantic_version_coltype) send_email() (in module cardinal_pythonlib.email.sendmail) send_msg() (in module cardinal_pythonlib.email.sendmail) service() (cardinal_pythonlib.winservice.WindowsService method) set_level_for_logger_and_its_handlers() (in module cardinal_pythonlib.logs) set_matplotlib_fontsize() (in module cardinal_pythonlib.plot) set_metadata() (cardinal_pythonlib.sqlalchemy.table_identity.TableIdentity method) set_metadata_if_none() (cardinal_pythonlib.sqlalchemy.table_identity.TableIdentity method) set_null_values_in_dict() (in module cardinal_pythonlib.dicts) set_timing() (cardinal_pythonlib.timing.MultiTimer method) set_verbose_logging() (in module cardinal_pythonlib.rnc_db) setdefault() (cardinal_pythonlib.dicts.CaseInsensitiveDict method) (cardinal_pythonlib.dicts.LazyDict method) setinputsizes() (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType method) setoutputsize() (cardinal_pythonlib.typing_helpers.Pep249DatabaseCursorType method) SHA256Hasher (class in cardinal_pythonlib.hash) SHA512Hasher (class in cardinal_pythonlib.hash) shortest_duration() (cardinal_pythonlib.interval.IntervalList method) shortest_gap() (cardinal_pythonlib.interval.IntervalList method) shortest_gap_duration() (cardinal_pythonlib.interval.IntervalList method) shortest_interval() (cardinal_pythonlib.interval.IntervalList method) shortform (cardinal_pythonlib.snomed.SnomedBase attribute) should_exclude() (cardinal_pythonlib.sphinxtools.AutodocIndex method) show() (cardinal_pythonlib.source_reformatting.PythonProcessor method) ShowAllSubparserHelpAction (class in cardinal_pythonlib.argparse_func) shutil_rmtree_onerror() (in module cardinal_pythonlib.fileops) signed_to_twos_comp() (in module cardinal_pythonlib.hash) sigterm_trapper() (in module cardinal_pythonlib.signalfunc) simple_eq() (in module cardinal_pythonlib.json.serialize) simple_repr() (in module cardinal_pythonlib.reprfunc) sizeof_fmt() (in module cardinal_pythonlib.sizeformatter) slice_pdf() (in module cardinal_pythonlib.tools.pdf_to_booklet) smart_open() (in module cardinal_pythonlib.file_io) snomed_concept() (cardinal_pythonlib.athena_ohdsi.AthenaConceptRow method) SnomedAttribute (class in cardinal_pythonlib.snomed) SnomedAttributeGroup (class in cardinal_pythonlib.snomed) SnomedAttributeSet (class in cardinal_pythonlib.snomed) SnomedBase (class in cardinal_pythonlib.snomed) SnomedConcept (class in cardinal_pythonlib.snomed) SnomedExpression (class in cardinal_pythonlib.snomed) SnomedFocusConcept (class in cardinal_pythonlib.snomed) SnomedRefinement (class in cardinal_pythonlib.snomed) SnomedValue (class in cardinal_pythonlib.snomed)

softmax() (in module cardinal_pythonlib.maths_numpy) sort_list_by_index_list() (in module cardinal_pythonlib.lists) source_extension (cardinal_pythonlib.sphinxtools.FileToAutodocument attribute) source_filename_rel_project_root (cardinal_pythonlib.sphinxtools.FileToAutodocument attribute) source_filename_rel_python_root (cardinal_pythonlib.sphinxtools.FileToAutodocument attribute) source_filename_rel_rst_file (cardinal_pythonlib.sphinxtools.FileToAutodocument attribute) specific_file_rst_filename() (cardinal_pythonlib.sphinxtools.AutodocIndex method) split_string() (in module cardinal_pythonlib.stringfunc) sql_column_like_drug() (cardinal_pythonlib.psychiatry.drugs.Drug method) sql_comment() (in module cardinal_pythonlib.sql.literals) sql_date_literal() (in module cardinal_pythonlib.sql.literals) sql_datetime_literal() (in module cardinal_pythonlib.sql.literals) sql_dequote_string() (in module cardinal_pythonlib.rnc_db) (in module cardinal_pythonlib.sql.literals) sql_like_fragments (cardinal_pythonlib.psychiatry.drugs.Drug attribute) sql_quote_string() (in module cardinal_pythonlib.rnc_db) (in module cardinal_pythonlib.sql.literals) sql_string_literal() (in module cardinal_pythonlib.sql.literals) sqla_column_type() (cardinal_pythonlib.hash.GenericHasher method) SqlaColumnInspectionInfo (class in cardinal_pythonlib.sqlalchemy.schema) SqlaDialectName (class in cardinal_pythonlib.sqlalchemy.dialect) SqlGrammar (class in cardinal_pythonlib.sql.sql_grammar) SqlGrammarMSSQLServer (class in cardinal_pythonlib.sql.sql_grammar_mssql) SqlGrammarMySQL (class in cardinal_pythonlib.sql.sql_grammar_mysql) SQLServer (class in cardinal_pythonlib.rnc_db) stamp_allowing_unusual_version_table() (in module cardinal_pythonlib.sqlalchemy.alembic_func) start() (cardinal_pythonlib.timing.MultiTimer method) (cardinal_pythonlib.winservice.ProcessManager method) start_date() (cardinal_pythonlib.interval.IntervalList method) start_datetime() (cardinal_pythonlib.interval.IntervalList method) stirlerr (in module cardinal_pythonlib.rpm) stop() (cardinal_pythonlib.timing.MultiTimer method) (cardinal_pythonlib.winservice.ProcessManager method) str2bool() (in module cardinal_pythonlib.argparse_func) StrEnum (class in cardinal_pythonlib.enumlike) strfdelta() (in module cardinal_pythonlib.datetimefunc) StringListType (class in cardinal_pythonlib.sqlalchemy.list_types) strip_leading_underscores_from_keys() (in module cardinal_pythonlib.json.serialize) strnum() (in module cardinal_pythonlib.stringfunc) strnumlist() (in module cardinal_pythonlib.stringfunc) strseq() (in module cardinal_pythonlib.stringfunc) subset() (cardinal_pythonlib.interval.IntervalList method) sufficient_gaps() (cardinal_pythonlib.interval.IntervalList method) sum_of_integers_in_inclusive_range() (in module cardinal_pythonlib.maths_py) SvcDoRun() (cardinal_pythonlib.winservice.WindowsService method) SvcStop() (cardinal_pythonlib.winservice.WindowsService method) svg_html_from_pyplot_figure() (in module cardinal_pythonlib.plot)

T

table (cardinal_pythonlib.sqlalchemy.table_identity.TableIdentity attribute) table_exists() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) (in module cardinal_pythonlib.sqlalchemy.schema) table_or_view_exists() (in module cardinal_pythonlib.sqlalchemy.schema) TableIdentity (class in cardinal_pythonlib.sqlalchemy.table_identity) tablename (cardinal_pythonlib.sqlalchemy.table_identity.TableIdentity attribute) tar_supports_force_local_switch() (in module cardinal_pythonlib.buildfunc) tee() (in module cardinal_pythonlib.tee) tee_log() (in module cardinal_pythonlib.tee) TeeContextManager (class in cardinal_pythonlib.tee) teed_call() (in module cardinal_pythonlib.tee) test() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) test_dialect_specific_1() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) test_dialect_specific_2() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) (cardinal_pythonlib.sql.sql_grammar_mssql.SqlGrammarMSSQLServer class method) (cardinal_pythonlib.sql.sql_grammar_mysql.SqlGrammarMySQL class method) test_expr() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) test_get_dict() (in module cardinal_pythonlib.psychiatry.rfunc) test_identifiers() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) test_nhs_rng() (in module cardinal_pythonlib.nhs) test_select() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method)

test_select_fail() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) test_service() (cardinal_pythonlib.winservice.WindowsService method) test_sql_core() (cardinal_pythonlib.sql.sql_grammar.SqlGrammar class method) test_windows_utf8_output() (in module cardinal_pythonlib.platformfunc) text_result() (in module cardinal_pythonlib.rnc_web) TextProcessingConfig (class in cardinal_pythonlib.extract_text) tick() (cardinal_pythonlib.progress.ActivityCounter method) time_afterwards_preceding() (cardinal_pythonlib.interval.IntervalList method) timedelta_days() (in module cardinal_pythonlib.psychiatry.treatment_resistant_depression) to_bytes() (in module cardinal_pythonlib.hash) to_str() (in module cardinal_pythonlib.hash) total_duration() (cardinal_pythonlib.interval.IntervalList method) trap_ctrl_c_ctrl_break() (in module cardinal_pythonlib.signalfunc) trunc_if_integer() (in module cardinal_pythonlib.formatting) truncate() (in module cardinal_pythonlib.rounding) truncate_date_to_first_of_month() (in module cardinal_pythonlib.datetimefunc) tsv_escape() (in module cardinal_pythonlib.tsv) tsv_pairs_to_dict() (in module cardinal_pythonlib.tsv) tsv_result() (in module cardinal_pythonlib.rnc_web) two_antidepressant_episodes() (in module cardinal_pythonlib.psychiatry.treatment_resistant_depression) two_antidepressant_episodes_single_patient() (in module cardinal_pythonlib.psychiatry.treatment_resistant_depression) twos_comp_to_signed() (in module cardinal_pythonlib.hash)

U

unescape_newlines() (in module cardinal_pythonlib.text) unescape_tabs_newlines() (in module cardinal_pythonlib.text) union() (cardinal_pythonlib.interval.Interval method) unique_list() (in module cardinal_pythonlib.lists) unmonkeypatch_TableClause() (in module cardinal_pythonlib.sqlalchemy.insert_on_duplicate)

untar_to_directory() (in module cardinal_pythonlib.buildfunc) update() (cardinal_pythonlib.dicts.CaseInsensitiveDict method) update_external_tools() (in module cardinal_pythonlib.extract_text) update_object_in_db() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) UriSchemes (class in cardinal_pythonlib.tcpipconst) (class in cardinal_pythonlib.uriconst)

V

val_int() (in module cardinal_pythonlib.tools.estimate_mysql_memory_usage) val_mb() (in module cardinal_pythonlib.tools.estimate_mysql_memory_usage) valid_choice() (in module cardinal_pythonlib.django.fields.helpers)

validate_pair() (in module cardinal_pythonlib.platformfunc) verify_initdict() (in module cardinal_pythonlib.json.serialize) view_exists() (in module cardinal_pythonlib.sqlalchemy.schema)

W

wait() (cardinal_pythonlib.winservice.ProcessManager method) warning() (cardinal_pythonlib.winservice.ProcessManager method) webify() (in module cardinal_pythonlib.rnc_web) webify_file() (in module cardinal_pythonlib.file_io) websafe() (in module cardinal_pythonlib.rnc_web) which_and_require() (in module cardinal_pythonlib.fileops) which_with_envpath() (in module cardinal_pythonlib.fileops) wholeday() (cardinal_pythonlib.interval.Interval static method) windows_get_environment_from_batch_command() (in module cardinal_pythonlib.platformfunc) WindowsService (class in cardinal_pythonlib.winservice) wipe_table() (cardinal_pythonlib.rnc_db.DatabaseSupporter method) with_typehint() (in module cardinal_pythonlib.typing_helpers) with_typehints() (in module cardinal_pythonlib.typing_helpers) within() (cardinal_pythonlib.interval.Interval method)

wordwrap() (in module cardinal_pythonlib.extract_text) wrap_args_kwargs_to_initdict() (in module cardinal_pythonlib.json.serialize) wrap_kwargs_to_initdict() (in module cardinal_pythonlib.json.serialize) write() (cardinal_pythonlib.tee.TeeContextManager method) write_gzipped_text() (in module cardinal_pythonlib.file_io) write_if_allowed() (in module cardinal_pythonlib.sphinxtools) write_index() (cardinal_pythonlib.sphinxtools.AutodocIndex method) write_index_and_rst_files() (cardinal_pythonlib.sphinxtools.AutodocIndex method) write_rst() (cardinal_pythonlib.sphinxtools.FileToAutodocument method) write_text() (in module cardinal_pythonlib.file_io) writeline_nl() (in module cardinal_pythonlib.file_io) writelines_nl() (in module cardinal_pythonlib.file_io) wsgi_simple_responder() (in module cardinal_pythonlib.rnc_web) WsgiEnvVar (class in cardinal_pythonlib.wsgi.constants)

X

xml_result() (in module cardinal_pythonlib.rnc_web)

Z

zip_result() (in module cardinal_pythonlib.rnc_web)